Dictyostelium discoideum cDNA Clone AFA112

Sequence AFA112

ACTGTTGGCC TACTGGNAAT TTCTCCAATC ATCATATTTA TAATTATATC
TTTTTTGTTT AATAAAAAAG AAAGAATACC AACATGAGAC TTTTATTGTG
TTTAATTTTC TTAGTTTTTG TTTTCAATTT TGCATTATCA ACAGTTCATT
TCAAAGTATA CCTTTGATAA CGATTGGGAA TCAAGATGGG TTGTTAGTGA
TTGGCATAAA GAAGATGGTA AATCAGGTAA ATTAGTTCAT ACTGCAGGTA
AATGGTTTGG TGATGAAAAT CAAAAAGGTA TTCAAACTAG TGAAGATGCT
CGTTTCTACG CTGTATCAGC TAAATTCCCA AGTTTCAGTA ACAAAGGTAA
AGATTTAGTT CTCCAATACA CTGTAAAGAA TGAACAAAAA GTTGATTGTG
GTGGTTCATA CATCAAGTTA TTACCATCCA AATTAGATCA ATCAGCATTC
GATGGTGAAT CTGAATATTC CATTATGTTT GGTCCAGATG TTTGTGGTGC
CTCAAAGAGA GTTCACGTCA TTCTCAACTA CAAAGGAAAG AACCATTT--
--------TT AAACCAGCCG GTCATGNCGA TATCCCAGCT TCAATCGNTG
ATCCAGAAGC TGTCAAACCA GAGGATTGGA ATGAAGAAGA CGACGGTGAA
TGGGAAGCCC CAACCATCGC CAATCCAGAA TACAAAGGTG AATGGAAAGC
AAAGAAAATC CCAAATCCAG AATACAAAGG TGAATGGGNA CACCCATTAA
TTGATAACCC AGAATACGCT GAAGACAATG AACTCTACCT CTTTAATGAT
CTCGGTGCTA TCGGTTTCGA ATTATGGCAA GTTAAATCTG GTTCCATCTT
TAACAATATG ATCGTCNCCG ACTCTGTCGA AGAAGCTAAA GATTTCTCTG
AAAAGACCTT TGTTGCCAAC CAAGAAGCCG AAAAGAAAAT GTTTGACGAC
CTCGAAGCCG CCAAAGCTGA AGAGAGAAAG AAAGCTGACG AAAAATTAGC
NGCCGAAAAA GCTGCTGAAA AAGAAGCCGA AGAAGCTGAT GAAGAAGAAG
AAGAAGTCGC TGAAGAAGAT TTAGTTAAAA CTGATGACAA AAAGAAGAAG
GCAAAAAAT

Translated Amino Acid Sequence AFA112

tvgllxispiiifiiisflfnkkeript*dfycv*fs*FLFSILHYQQFISKYTFDNDWE
SRWVVSDWHKEDGKSGKLVHTAGKWFGDENQKGIQTSEDARFYAVSAKFPSFSNKGKDLV
LQYTVKNEQKVDCGGSYIKLLPSKLDQSAFDGESEYSIMFGPDVCGASKRVHVILNYKGK
NH---

---KPAGHXDIPASIXDPEAVKPEDWNEEDDGEWEAPTIANPEYKGEWKAKKIPNPEYKG
EWXHPLIDNPEYAEDNELYLFNDLGAIGFELWQVKSGSIFNNMIVXDSVEEAKDFSEKTF
VANQEAEKKMFDDLEAAKAEERKKADEKLAAEKAAEKEAEEADEEEEEVAEEDLVKTDDK
KKKAKN

Homology AFA112 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


AFA112 (AFA112Q) /CSM/AF/AFA1-A/AFA112Q.Seq.d/                       1816   0.0
AFH646 (AFH646Q) /CSM/AF/AFH6-B/AFH646Q.Seq.d/                       1065   0.0
VFL283 (VFL283Q) /CSM/VF/VFL2-D/VFL283Q.Seq.d/                       1055   0.0
VFL214 (VFL214Q) /CSM/VF/VFL2-A/VFL214Q.Seq.d/                       1055   0.0
AFI321 (AFI321Q) /CSM/AF/AFI3-A/AFI321Q.Seq.d/                       1055   0.0
AFK274 (AFK274Q) /CSM/AF/AFK2-D/AFK274Q.Seq.d/                       1041   0.0
AFK242 (AFK242Q) /CSM/AF/AFK2-B/AFK242Q.Seq.d/                       1041   0.0
SFH596 (SFH596Q) /CSM/SF/SFH5-D/SFH596Q.Seq.d/                       1039   0.0
VFN642 (VFN642Q) /CSM/VF/VFN6-B/VFN642Q.Seq.d/                       1037   0.0
VFM435 (VFM435Q) /CSM/VF/VFM4-B/VFM435Q.Seq.d/                       1037   0.0

Homology AFA112 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(U36937) Dictyostelium discoideum calreticulin mRNA, complet...   777   0.0    4
(BJ325702) Dictyostelium discoideum cDNA clone:dda1g03, 5' e...   827   0.0    2
(BJ326415) Dictyostelium discoideum cDNA clone:dda16k12, 5' ...   775   0.0    3
(BJ326592) Dictyostelium discoideum cDNA clone:dda17j05, 5' ...   775   0.0    4
(BJ415802) Dictyostelium discoideum cDNA clone:ddv23e22, 5' ...   775   0.0    4
(BJ415615) Dictyostelium discoideum cDNA clone:ddv23k04, 5' ...   775   0.0    4
(BJ324213) Dictyostelium discoideum cDNA clone:dda5f11, 5' e...   775   0.0    3
(BJ323412) Dictyostelium discoideum cDNA clone:dda10a15, 5' ...   775   0.0    3
(BJ414096) Dictyostelium discoideum cDNA clone:ddv18e06, 5' ...   775   0.0    3
(BJ391033) Dictyostelium discoideum cDNA clone:dds14b20, 5' ...   775   0.0    3

Homology AFA112 vs Protein

Sequences producing significant alignments:                      (bits) Value


U36937_1(U36937|pid:none) Dictyostelium discoideum calreticulin ...   276   1e-72
AC133339_28(AC133339|pid:none) Oryza sativa chromosome 3 BAC OSJ...   182   2e-44
EF085019_1(EF085019|pid:none) Picea sitchensis clone WS0297_I16 ...   182   3e-44
AK318734_1(AK318734|pid:none) Arabidopsis thaliana AT1G56340 mRN...   181   7e-44
CP002684_6164(CP002684|pid:none) Arabidopsis thaliana chromosome...   181   7e-44
AF283816_1(AF283816|pid:none) Pinus taeda calreticulin mRNA, com...   180   1e-43
U66344_1(U66344|pid:none) Arabidopsis thaliana calreticulin (Crt...   180   1e-43
U27698_1(U27698|pid:none) Arabidopsis thaliana calreticulin (AtC...   180   1e-43
EU984501_1(EU984501|pid:none) Nicotiana tabacum calreticulin mRN...   179   2e-43
EF084103_1(EF084103|pid:none) Picea sitchensis clone WS0274_F04 ...   179   2e-43

Homology AFA112 vs Genome