Dictyostelium discoideum cDNA Clone AFA105

Sequence AFA105

ACTGTTGGCC TACTGGTTTT TTTATCGCCT CACTTTTTAT TTTTGTATTA
TATTCTCTCT TTATTTCTTT TCTATATATA GATAAATTTT TTTTAGAAAA
ACTAAAAAAA AAAACCTCAA ACAATTAANA CAAAANGGTA AACATTGGNG
GAACTCANGA AAAANGNACT GNATGTGCTA AAACTGTNTA CTTAACAGAA
AAGATTGTAG TTGAAGATAA AGAAGATAAG AAAACTTTCC ACAAATTATG
TTTAAAANGT NCTCACTGTA NGCTTACATT AAGTCTTGGN AACTATGCAT
NATTAAANGG ----------

Translated Amino Acid Sequence AFA105

cwptgffiaslfifvlyslfisflyidkffleklkkktsnn*XKXVNIGGTXEKXTXCAK
TVYLTEKIVVEDKEDKKTFHKLCLKXXHCXLTLSLGNYAXLX---

Homology AFA105 vs CSM-cDNA

Sequences producing significant alignments:                      (bits) Value


VFK172 (VFK172Q) /CSM/VF/VFK1-C/VFK172Q.Seq.d/                        305   2e-82
VFJ444 (VFJ444Q) /CSM/VF/VFJ4-B/VFJ444Q.Seq.d/                        305   2e-82
VFG695 (VFG695Q) /CSM/VF/VFG6-D/VFG695Q.Seq.d/                        305   2e-82
SSM637 (SSM637Q) /CSM/SS/SSM6-B/SSM637Q.Seq.d/                        305   2e-82
SFL216 (SFL216Q) /CSM/SF/SFL2-A/SFL216Q.Seq.d/                        305   2e-82
SFK508 (SFK508Q) /CSM/SF/SFK5-A/SFK508Q.Seq.d/                        305   2e-82
SFK142 (SFK142Q) /CSM/SF/SFK1-B/SFK142Q.Seq.d/                        305   2e-82
SFI831 (SFI831Q) /CSM/SF/SFI8-B/SFI831Q.Seq.d/                        305   2e-82
SFH103 (SFH103Q) /CSM/SF/SFH1-A/SFH103Q.Seq.d/                        305   2e-82
SFF706 (SFF706Q) /CSM/SF/SFF7-A/SFF706Q.Seq.d/                        305   2e-82

Homology AFA105 vs DNA

Sequences producing significant alignments:                  (bits) Value  N


(BJ325708) Dictyostelium discoideum cDNA clone:dda1i01, 5' e...   305   2e-81  2
(BJ327415) Dictyostelium discoideum cDNA clone:dda20i07, 5' ...   305   5e-81  2
(BJ326599) Dictyostelium discoideum cDNA clone:dda17l03, 5' ...   299   3e-79  2
(BJ415178) Dictyostelium discoideum cDNA clone:ddv21o17, 5' ...   305   6e-79  1
(BJ414490) Dictyostelium discoideum cDNA clone:ddv19h12, 5' ...   305   6e-79  1
(BJ413278) Dictyostelium discoideum cDNA clone:ddv14m24, 5' ...   305   6e-79  1
(BJ391092) Dictyostelium discoideum cDNA clone:dds15e01, 5' ...   305   6e-79  1
(BJ390646) Dictyostelium discoideum cDNA clone:dds23o04, 5' ...   305   6e-79  1
(BJ390377) Dictyostelium discoideum cDNA clone:dds22o01, 5' ...   305   6e-79  1
(BJ390132) Dictyostelium discoideum cDNA clone:dds21c11, 5' ...   305   6e-79  1

Homology AFA105 vs Protein

Sequences producing significant alignments:                      (bits) Value


AC135208_4(AC135208|pid:none) Oryza sativa (japonica cultivar-gr...    44   0.003
GQ165934_1(GQ165934|pid:none) TSA: Lycoris longituba LlTF-LIM-4 ...    42   0.008
AC160095_6(AC160095|pid:none) Solanum lycopersicum clone BB, com...    41   0.018
EU186001_1(EU186001|pid:none) Lilium longiflorum LIM1 mRNA, comp...    41   0.024
BT068434_1(BT068434|pid:none) Zea mays full-length cDNA clone ZM...    41   0.024
AM475696_4(AM475696|pid:none) Vitis vinifera contig VV78X042996....    40   0.031
AB079511_1(AB079511|pid:none) Populus kitakamiensis Pklim1 gene ...    40   0.031
EU482903_1(EU482903|pid:none) Pinus taeda LIM2 transcription fac...    40   0.031
EF145390_1(EF145390|pid:none) Populus trichocarpa clone WS01124_...    40   0.031
AF116851_1(AF116851|pid:none) Nicotiana tabacum LIM domain prote...    40   0.031

Homology AFA105 vs Genome